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- European Joint Master's programme in English and American Studies
- International Graduate Study Programme in Cultural Sociology
- International Master's Programme on Circular Economy
- Joint International Master‘s Programme in Sustainable Development
- Joint Master's Programme in Southeast European Studies
- Joint Master’s Programme in Translation (Slovenian/German/English)
- Joint Master’s Programme Jewish Studies – History of Cultures of the Jews
- Master Computational Social Systems
- Master Early Childhood Education
- Master Environmental Systems Sciences / Climate Change and Transformation Science
- Master's programme Adult and Continuing Education
- Master's programme Advanced Materials Science
- Master's programme Ancient History and Classical Antiquities
- Master's programme Applied Ethics
- Master's programme Applied Physical Geography and Mountain Research
- Master's programme Archeology
- Master's programme Art History
- Master's programme Biochemistry and Molecular Biomedicine
- Master's programme Biotechnology
- Master's programme Business Administration
- Master's programme Business Education and Development
- Master's programme Chemical and Pharmaceutical Engineering
- Master's programme Chemistry
- Master's programme English and American Studies
- Master's programme Environmental System Sciences / Climate Change and Environmental Technology
- Master's programme Environmental System Sciences / Sustainability and Innovation Management
- Master's programme European Ethnology
- Master's programme General Secondary Level Teacher Training
- Master's programme Geosciences
- Master's programme Geospatial Technologies
- Master's programme German Language and Literature
- Master's programme Global Studies – Specialisation Economics and Environment
- Master's programme Global Studies – Specialisation Law and Politics
- Master's programme Global Studies – Specialisation Society and Culture
- Master's programme Historical Science
- Master's programme Inclusive Education
- Master's programme Interdisciplinary Women’s and Gender Studies
- Master's programme Linguistics
- Master's programme Mathematics
- Master's programme Musicology
- Master's programme Philosophy
- Master's programme Physics
- Master's programme Political and Empirical Economics
- Master's programme Political, Economic and Legal Philosophy (PELP)
- Master's programme Psychology
- Master's programme Romance Studies (French, Italian, Spanish)
- Master's programme Sociology
- Master's programme Space Sciences and Earth from Space
- Master's programme teaching specialising Advanced Catholic Religious Education for Primary Level
- Master's programme teaching specialising in Inclusive Education with a focus on Disability
- Master's programme teaching subject Biology and Environmental Education
- Master's programme teaching subject Bosnian/Croat/Serbian
- Master's programme teaching subject Catholic Religion
- Master's programme teaching subject Chemistry
- Master's programme teaching subject English
- Master's programme teaching subject French
- Master's programme teaching subject Geography and Economics
- Master's programme teaching subject German
- Master's programme teaching subject Greek
- Master's programme teaching subject History, Social Studies and Political Education
- Master's programme teaching subject Human Kinetics and Sports
- Master's programme teaching subject Italian
- Master's programme teaching subject Latin
- Master's programme teaching subject Mathematics
- Master's programme teaching subject Nutrition, Health and Consumer Education
- Master's programme teaching subject Physics
- Master's programme teaching subject Psychology/Philosophy
- Master's programme teaching subject Russian
- Master's programme teaching subject Slovenian
- Master's programme teaching subject Spanish
- Master's programme Technical Chemistry
- Master's programme Technical Physics
- Master's programme Translation
- Master's programme Translation and Dialogue Interpreting
- Master’s programme Behavioural Physiology
- Master’s programme Classical Philology (Latin/Greek)
- Master’s programme Conference Interpreting
- Master’s programme Digital Humanities
- Master’s programme Ecology and Evolutionary Biology
- Master’s programme Environmental Systems Sciences - Economics
- Master’s programme Environmental Systems Sciences - Geography and Applied Human-Environment Research
- Master’s programme Molecular Microbiology
- Master’s programme Pharmacy
- Master’s programme Plant Sciences
- Master’s programme Slavic Languages, Literary and Cultural Studies
- Master’s programme Social Pedagogy
- Master’s programme Sports Science and Kinesiology
- Master’s programme Sustainable Urban and Regional Development
- Religion Culture Society